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4th Colloquium of the CRC 1349

January 16, 2020; Guests: William C.K. Pomerantz (Minneapolis), Marie Pierre Krafft (Strasbourg) Diana Gimenez-Ibanez (Durham; Young Talent Award Winner 2019), Tewes Tralau (BfR Berlin)

Feb 01, 2019

Happy Birthday CRC 1349

Happy Birthday CRC 1349

The Berlin Young Talents Award for Fluorine Chemistry 2019 goes to Dr. Diana Gimenez-Ibanez, f.l.: Prof. S. Hasenstab-Riedel (FU-Berlin), Dr. D. Gimenez-Ibanez (Durham), S. Gutmann (Solvay)

The Berlin Young Talents Award for Fluorine Chemistry 2019 goes to Dr. Diana Gimenez-Ibanez, f.l.: Prof. S. Hasenstab-Riedel (FU-Berlin), Dr. D. Gimenez-Ibanez (Durham), S. Gutmann (Solvay)

Guest of the 4th Colloquium: Prof. William C.K. Pomerantz (Minneapolis)

Guest of the 4th Colloquium: Prof. William C.K. Pomerantz (Minneapolis)

Coffee Break of the 4th Colloquium

Coffee Break of the 4th Colloquium

Lecture by Valentina Stulberg (PhD student of the CRC 1349)

Lecture by Valentina Stulberg (PhD student of the CRC 1349)

Guest of the 4th Colloquium: Prof. Marie Pierre Krafft (Strasbourg)

Guest of the 4th Colloquium: Prof. Marie Pierre Krafft (Strasbourg)

Auditorium of the 4th Colloquium

Auditorium of the 4th Colloquium

Lecture by Svenja Ehrmann (PhD student of the CRC 1349)

Lecture by Svenja Ehrmann (PhD student of the CRC 1349)

Auditorium of the 4th Colloquium

Auditorium of the 4th Colloquium

Constructive Break of the 4th Colloquium

Constructive Break of the 4th Colloquium

Constructive Break of the 4th Colloquium

Constructive Break of the 4th Colloquium

Constructive Break of the 4th Colloquium

Constructive Break of the 4th Colloquium

Guest of the 4th Colloquium: Dr. Tewes Tralau (BfR Berlin)

Guest of the 4th Colloquium: Dr. Tewes Tralau (BfR Berlin)

On January 16, 2020, all members of the CRC 1349 will meet for the fourth Colloquium. The event will take place in the big lecture hall in the Arminallee 22.

  • Presentation by Dr. Diana Gimenez-Ibanez (Durham, UK):

    Exploring the applications of fluorine for peptoid structure induction
  • Presentation by Prof. William C.K. Pomerantz (Minneapolis, USA):

Inspiration from Fluorination: Chemical Biology Approaches to Probe Molecular Recognition Events in Transcription

Protein-protein interaction inhibitor discovery has proven difficult due to the large surface area and dynamic interfaces of proteins. To facilitate the early lead discovery rate, I will first describe a rapid protein-based 19F NMR method for detecting protein-ligand interactions by screening low complexity molecules (fragments), drug-like molecules, and peptidomimetics. We label the aromatic amino acids with the highly sensitive fluorine atom, due to the high conservation of aromatic residues at protein interfaces, and recently developed methods for simultaneous labeling with two different types of fluorinated aromatic amino acids. We have tested the sensitivity, accuracy, and speed of this method with the protein interaction through screening libraries of small molecule fragments. These studies have led to both new insights regarding allosteric regulation of protein-protein interactions, and the discovery of a new small molecule binding site. In the second part of the talk, I will describe improvements in our method for the field of epigenetics targeting bromodomain-containing proteins. These studies have led to the discovery of some of the first selective ligands for the bromodomain BPTF and new submicromolar ligands for N-terminal domain of BRD4. The speed, ease of interpretation, and low concentration of protein needed for binding experiments affords a new method to discover and characterize both native and new ligands for bromodomains and may find utility in the study of additional epigenetic “reader” domains.

  • Presentation by Prof. Marie Pierre Krafft (Strasbourg, FR):

Fluorine specifics-enabled advances in fluorocarbon-assisted oxygen delivery, diagnosis and therapy

  • Presentation by Dr. Tewes Tralau (BfR Berlin):

Fluorinated Compounds from a Regulatory Perspective